Whole-Genome Sequencing of Pharmacogenetic Drug Response in Racially Diverse Children with Asthma.

TitleWhole-Genome Sequencing of Pharmacogenetic Drug Response in Racially Diverse Children with Asthma.
Publication TypeJournal Article
Year of Publication2018
AuthorsC Y Mak, A, White, MJ, Eckalbar, WL, Szpiech, ZA, Oh, SS, Pino-Yanes, M, Hu, D, Goddard, P, Huntsman, S, Galanter, J, Wu, AChen, Himes, BE, Germer, S, Vogel, JM, Bunting, KL, Eng, C, Salazar, S, Keys, KL, Liberto, J, Nuckton, TJ, Nguyen, TA, Torgerson, DG, Kwok, P-Y, Levin, AM, Celedón, JC, Forno, E, Hakonarson, H, Sleiman, PM, Dahlin, A, Tantisira, KG, Weiss, ST, Serebrisky, D, Brigino-Buenaventura, E, Farber, HJ, Meade, K, Lenoir, MA, Avila, PC, Sen, S, Thyne, SM, Rodriguez-Cintron, W, Winkler, CA, Moreno-Estrada, A, Sandoval, K, Rodriguez-Santana, JR, Kumar, R, L Williams, K, Ahituv, N, Ziv, E, Seibold, MA, Darnell, RB, Zaitlen, N, Hernandez, RD, Burchard, EG
Corporate AuthorsNHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium
JournalAm J Respir Crit Care Med
Volume197
Issue12
Pagination1552-1564
Date Published2018 Jun 15
ISSN1535-4970
Abstract

RATIONALE: Albuterol, a bronchodilator medication, is the first-line therapy for asthma worldwide. There are significant racial/ethnic differences in albuterol drug response.

OBJECTIVES: To identify genetic variants important for bronchodilator drug response (BDR) in racially diverse children.

METHODS: We performed the first whole-genome sequencing pharmacogenetics study from 1,441 children with asthma from the tails of the BDR distribution to identify genetic association with BDR.

MEASUREMENTS AND MAIN RESULTS: We identified population-specific and shared genetic variants associated with BDR, including genome-wide significant (P 

CONCLUSIONS: The lack of minority data, despite a collaboration of eight universities and 13 individual laboratories, highlights the urgent need for a dedicated national effort to prioritize diversity in research. Our study expands the understanding of pharmacogenetic analyses in racially/ethnically diverse populations and advances the foundation for precision medicine in at-risk and understudied minority populations.

DOI10.1164/rccm.201712-2529OC
Alternate JournalAm. J. Respir. Crit. Care Med.
PubMed ID29509491
PubMed Central IDPMC6006403
Grant ListR01 ES015794 / ES / NIEHS NIH HHS / United States
K01 HL130629 / HL / NHLBI NIH HHS / United States
K08 HL125666 / HL / NHLBI NIH HHS / United States
R01 HL120393 / HL / NHLBI NIH HHS / United States
R01 DK113003 / DK / NIDDK NIH HHS / United States
K01 HL140218 / HL / NHLBI NIH HHS / United States
K12 GM081266 / GM / NIGMS NIH HHS / United States
R01 CA197139 / CA / NCI NIH HHS / United States
R01 HG006399 / HG / NHGRI NIH HHS / United States
R01 AI079139 / AI / NIAID NIH HHS / United States
UM1 HG008901 / HG / NHGRI NIH HHS / United States
R37 HL066289 / HL / NHLBI NIH HHS / United States
U01 HG008684 / HG / NHGRI NIH HHS / United States
R01 HL135156 / HL / NHLBI NIH HHS / United States
R01 HL133433 / HL / NHLBI NIH HHS / United States
P30 ES013508 / ES / NIEHS NIH HHS / United States
R01 HL128439 / HL / NHLBI NIH HHS / United States
R01 HL117004 / HL / NHLBI NIH HHS / United States
P60 MD006902 / MD / NIMHD NIH HHS / United States
R21 ES024844 / ES / NIEHS NIH HHS / United States
R01 HL117626 / HL / NHLBI NIH HHS / United States
K99 HL135403 / HL / NHLBI NIH HHS / United States
K25 HL121295 / HL / NHLBI NIH HHS / United States
R01 HL118267 / HL / NHLBI NIH HHS / United States
RL5 GM118984 / GM / NIGMS NIH HHS / United States
P01 HL132821 / HL / NHLBI NIH HHS / United States
R01 HL138424 / HL / NHLBI NIH HHS / United States
R01 MD010443 / MD / NIMHD NIH HHS / United States